Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792431.1_cds_XP_016512216.1_2411
CDS Infomation

[gene=LOC107829253] [db_xref=GeneID:107829253] [protein=laccase-15-like] [protein_id=XP_016512216.1] [location=complement(join(456..586,881..1831,2295..2423,2537..2781,2898..3049,3149..3250))] [gbkey=CDS]
Sequence

ATGATGGCTGGAGAAGTTGTTATGAGAACACACACTTTGAGTTTCATAGTTGTTGCCACC
TTCCTCCATTACGTAGCTTTTGCTAACCACTATCATTTCATCGTTAAAGAAGCTTCTTTC
GAAAGGCTGTGCAAATCAAAGGAAATTCTAACTGTGAATGGCAAGTTTCCAGGGCCGACC
CTCTATGCTCACAAAGGATCTACTCTTATTGTTGATGTCTATAACAAAGGGAAGTACAAC
CTCACTATTCACTGGCATGGAGTGAAACAACCACGGAATTCCTGGTCAGATGGCCCTGAA
TATATCACCCAGTGTCCAATTCAACCGGGCTCTAAATTCAGACAAAAAATAATACTTTCT
GATGAAGAAGGTACTATTTGGTGGCACGCGCACAGCGCTTGGGCGCGTGCCACAGTTCAT
GGCGCCATTGTTGTTTACCCCAAGCCCGGAACTAGTTATCCTTTTCCCAAGCCTCATGCT
GAAATACCAATTATTTTAGGTGAGTGGTGGAAGGACAGTGTTGTGGATGTTTTAAAGGAA
TTTACTGCCTCAGGAGGTCAGCCTATGAACTCTGATGCTTTTATGATTAATGGTCAGCCT
GGTGATTTTTACCCATGTTCAAAACATGGAACTTTCAAGCTAGAAGTTAAGTCTGGGAAG
ACTTATCTGCTAAGAATTCTTAATGCTGCAATGAATGAAATTCTCTTTTTCGCGATTGCA
AAGCACAAATTAACAGTGGTTGGAACAGATGGCAGCTACACAAAGCCATTGACAAGGGAT
TATATCGCGATAAGTCCTGGACAGACACTTGACTGCCTGTTTAAAGCCAATCAAGAACCT
AATTTTTACTACATGGCTGCTAGAGCATATACTAATGGGACTAATGTCCAATTTGATAAC
ACAACAACCACAGCCATTGTGAAATATGAAGGAAATTACTTGATTTCTTCACTGCCTTAT
TTACCTTCTTATGGTAACACACCTGCAGCTGTTAATTTCAGTGGCAGCCTAAGAAGTTTA
GCTTCTAAACACCATCCGATATCCGTCCCACTTAAAGTGAAAACAAGGTTGGTTTCAACT
GTTTCAATTAACTTATTGCCGTGTCCTATAAATGGTACAAATGTTACAACATGCCAAGGA
CCAAATGGGACACGATTATCGGCTAGTATGAACAACATAAGTTTTTTGACACCAACATAT
AACATACTAGAGGCCTATTATTATCACATTAAGGGCGTGTTTGGGACCAAATTTCCTAGT
TTTCCACTATATGTATTTAATTACACTGCTGATGTCCTGCCTTTAGAGCTCAAGTTACCT
GAATTCGGGACACAAGTGAAAGTGCTAGAGTATAATACAACAGTCGAGTTGGTACTTCAG
GGGACTAATTTGGTCACTGGCTTAGACCATCCAATGCATCTTCATGGGTACAATTTTTAC
GTTGTTGGTTGGGGATTGGGAAATTTTGACGAAAAACAGGATCCTCAGAACTATAATCTT
GTTGATCCTCCTCGAAGGAACACCGTTGCTATCCCTAGAAATGGTTGGATTGCTATTAGA
TTCAGGGCAGATAACCCAGGAGTTTGGATTATGCATTGCCATATTGAGCGCCATCTTACA
TGGGGGATGCGGACAGTGTTTATAGTGAAAAATGGACACAGGCCAGAAGAACGCATTTTC
TCTCCTCCTCAGGACATGCCACCTTGCTGA

Peptide Sequence

PEP ID

XP_016512216.1
PEP Infomation

PREDICTED: laccase-15-like [Nicotiana tabacum]
Sequence

MMAGEVVMRTHTLSFIVVATFLHYVAFANHYHFIVKEASFERLCKSKEILTVNGKFPGPT
LYAHKGSTLIVDVYNKGKYNLTIHWHGVKQPRNSWSDGPEYITQCPIQPGSKFRQKIILS
DEEGTIWWHAHSAWARATVHGAIVVYPKPGTSYPFPKPHAEIPIILGEWWKDSVVDVLKE
FTASGGQPMNSDAFMINGQPGDFYPCSKHGTFKLEVKSGKTYLLRILNAAMNEILFFAIA
KHKLTVVGTDGSYTKPLTRDYIAISPGQTLDCLFKANQEPNFYYMAARAYTNGTNVQFDN
TTTTAIVKYEGNYLISSLPYLPSYGNTPAAVNFSGSLRSLASKHHPISVPLKVKTRLVST
VSINLLPCPINGTNVTTCQGPNGTRLSASMNNISFLTPTYNILEAYYYHIKGVFGTKFPS
FPLYVFNYTADVLPLELKLPEFGTQVKVLEYNTTVELVLQGTNLVTGLDHPMHLHGYNFY
VVGWGLGNFDEKQDPQNYNLVDPPRRNTVAIPRNGWIAIRFRADNPGVWIMHCHIERHLT
WGMRTVFIVKNGHRPEERIFSPPQDMPPC

Transcript Sequence

Gene sequence data has not been registered.